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Detergent Clean Up
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ProteoSpin CBED
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ProteoSpin™ Detergent Clean-up Kits

Detergents are extensively used to prepare protein samples. However, detergents must often be removed prior to downstream analysis because of their undesirable effects. These include extraneous peaks in mass spectrometry, artifacts with chromatography and electrophoresis, interference with microinjection into cells and interference with protein immunization.

The ProteoSpin™ Detergent Clean-up Micro Kit provides a fast and simple procedure for the effective removal of SDS, Triton X-100 and other detergents from small samples up to 50 mg of protein. The kit employs an innovative separation material, silicon carbide (SiC). Processed using proprietary technology, SiC acts as an ion exchanger.

ProteoSpin™ Detergent Clean-up Kit Benefits

  • A complete kit for acidic and basic protein samples  - The ProteoSpin™ Detergent Clean-up Micro Kit contains necessary solutions for processing small detergent-containing samples from 2–50 mg of protein. Solutions for processing both acidic and basic proteins are included.
  • No detergent carryover - Unlike HPLC procedures, each sample is processed individually using its own spin tube providing no carryover or column bleed from sample to sample.
  • Useable with a variety of detergents - The kit can be used to remove detergents including SDS, Triton X-100, CHAPS, NP-40, and Tween 20.
  • Effective detergent removal - Removes more than 95% of detergents for many protein samples, allowing tryptic digestion.
  • High recovery - Protein recoveries of 80 to 95% for many proteins.

Fast processing time - In contrast to longer dialysis procedures, the easy-to-use procedure allows processing up to 12 samples in only 20 minutes.

Each ProteoSpin™ Detergent Clean-up Micro Kit spin tube contains 25 mg SiC. Capacity per spin tube is approximately 2-50µg and may vary depending on protein sample.

ProteoSpin™ Detergent Clean-up Micro Kit Contents

Each ProteoSpin™ Detergent Clean-up Micro Kit provides essential components for use with the provided protocols.

  • Column activation and wash buffer for acidic proteins
  • pH binding buffer for acidic proteins
  • Column activation and wash buffer for basic proteins
  • pH binding buffer for basic proteins
  • Elution buffer
  • Neutralizer
  • ProteoSpin™ SiC micro spin columns
  • Collection tubes (2 mL capacity)
  • Final collection tubes (1.7 mL capacity)
  • ProteoSpin™ Detergent Clean-up Micro Kit application manual
  • Protocol reference card for both acidic and basic procedures

Customer-supplied Reagents and Equipment

  • Benchtop microcentrifuge
  • Micropipettors
  • pH indicator paper
  • Other optional elution buffers
  • Isopropanol

Technical Note Abstract

The efficacy of the ProteoSpin™ Detergent Clean-up Kit to remove the commonly used non-ionic detergent Triton X-100 from a protein sample was investigated. For comparison, the efficacy of an ultrafiltration membrane that removes detergent based on size exclusion was also investigated.

The ProteoSpin™ procedure took approximately 20 minutes to complete and resulted in a recovery of 71.6% of the protein. No Triton-X 100 peaks were observed by mass spectrometry analysis, indicating that the ProteoSpin™ method effectively removed the Triton-X 100. In contrast, the ultrafiltration procedure took 2 hours to complete and the percent recovery could not be determined since residual detergent in the sample interferes with the BioRad protein assay. Ultrafiltration-processed protein was found to contain a series of characteristic Triton X-100 peaks.

Since Triton X-100 is inhibitory to trypsin digestion, purified protein solutions were mixed with trypsin and the resulting reaction mixtures were analyzed by SDS-PAGE. SDS-PAGE analysis demonstrated that the majority of protein recovered using the ProteoSpin™ procedure was digested by trypsin. In contrast, a substantial amount of protein recovered from the ultrafiltration membrane remained undigested.

 

Table 1 illustrates results of an experiment that examined the removal of the anionic detergent SDS with the ProteoSpin™ Detergent Clean-up Kit. The procedure removed more than 99% of the SDS from the protein sample.

Downloadable Detergent Removal Kit  Application Notes

Removal of SDS

Removal of Triton

Downloadable Instruction Manual

Detergent Removal Manual

 

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